Explore Your HISE Certificate of Reproducibility
| Abbreviations Key | |
| HISE | Human Immune System Explorer |
| IDE | integrated development environment |
At a Glance
This document shows you how to view nodes in a HISE certificate of reproducibility, review your profile, and complete your certificate exploration.
Description
Your HISE exploration is presented in a graph. Follow the steps in the certificate and click on specific nodes to drill down into the analysis of your result.
Choose your starting point
You can choose how to explore the certificate. Start at any point, from the initialization of the result to the final analysis, or jump in at an intermediary point.
You decide what the goal of your exploration is. For example, you can follow the certificate step by step to re-create a result, or you might prefer to limit your review to a specific part of the analysis that interests you.
View a node
To initiate an action, click on the following nodes. The selected node will be highlighted in yellow on the graph.
File
Copy a file into your exploration. Then pull it into an IDE or run it through a pipeline.
Pipeline
Initiate a pipeline in your exploration. Any input files that have not yet been ingested will also be copied in. Then you can examine each step in the pipeline, check its status while running, and review inputs and outputs at each step.
IDE
Clone and start an IDE in your exploration. Then you can examine the Jupyter notebook where computational analysis for a given step of the result was performed.
Complete your exploration
The point at which your exploration is complete depends on your goal. Once you achieve your objective, visit your profile to close your current exploration.
View your profile
To find your profile, click your username in the upper-right of the Exploration space. In your profile, you can review costs, view your explorations, or close an exploration.
Review costs of exploration
For your current exploration, you can see what is the running cost to-date since initiation.
View active explorations
Your profile contains a table containing your explorations. Buttons in the table allow you to do the following:
Switch to a specific exploration
Close an exploration
Close your account
Close your exploration or deactivate your account
Once you have reproduced the certificate and no longer want to incur costs, you can close the exploration or account.
Closing an exploration will do the following:
Delete the space
Stop any running processes or pipelines
Halt any running costs of resource utilization as a result of exploration
Deactivating your account also closes all open explorations. This terminates any running computation processes and deletes any data stored in your account.